Origin of visual experience-dependent theta oscillations

MP Zimmerman, ST Kissinger PA Edens, RC Towers, S Nareddula, YY Nadew, CJ Quinn, AA Chubykin.

Current Biology

2024

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Visual experience induces 4–8 Hz synchrony between V1 and higher-order visual areas.

Y Tang, C Gervais, R Moffitt, S Nareddula, M Zimmermann, YY Nadew, CJ Quinn, V Saldarriaga, PA Edens, AA Chubykin,

Cell Reports

2023

 

Deep learning-driven adaptive optics for single-molecule localization microscopy.

P Zhang, D Ma, X Cheng, AP Tsai, Y Tang, H Gao, L Fang, C Bi, G E Landreth, A A Chubykin & F Huang

Nature Methods

2023

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Impaired pre-synaptic plasticity and visual responses in Auxilin knockout mice

X Cheng, Y Tang, D.J. Vidyadhara, BZ Li, M Zimmerman, A Pak, S Nareddula, PA Edens, SS Chandra, AA Chubykin,

iScience
2023

​

Complex Oxides for Brain-Inspired Computing: A Review

TJ Park,  S Deng,  S Manna,  A. N. M. N Islam,  H Yu,  Y Yuan,  DD Fong,  AA Chubykin,  A Sengupta,  SKRS Sankaranarayanan,  S Ramanathan

Advanced Materials

2022

 

A 0.43 g Wireless Battery-Less Neural Recorder With On-Chip Microelectrode Array and Integrated Flexible Antenna

H Shan, J Peterson, NJ Conrad, Y Tang, Y Zhu, S Ghotbi, S Hathorn, AA Chubykin, S Mohammadi

IEEE Microwave and Wireless Components Letters 32(6):772-775

2022

 

Restoration of Visual Function and Cortical Connectivity After Ischemic Injury Through NeuroD1-Mediated Gene Therapy

Y Tang, Q Wu, M Gao, E Ryu, Z Pei, ST Kissinger, Y Chen, AK Rao, Z Xiang, T Wang, W Li, G Chen, AA Chubykin

Frontiers in Cell and Developmental Biology

2021

​

Impaired adaptation and laminar processing of the oddball paradigm in the primary visual cortex of Fmr1 KO mouse

A Pak, ST Kissinger, AA Chubykin

Frontiers in Cellular Neuroscience

2021

 

Visual familiarity induced 5 Hz oscillations and improved orientation and direction selectivities in V1

M Gao, S Lim and AA Chubykin

Journal of Neuroscience

2021

 

Cortical tuning is impaired after perceptual experience in primary visual cortex of serotonin transporter-deficient mice

A Pak, AA Chubykin

Cerebral Cortex Communications

2020

​

Potassium Channel-Associated Bioelectricity of the Dermomyotome Determines Fin Patterning in Zebrafish

MR Silic, Q Wu, BH Kim, G Golling, KH Chen, R Freitas, AA Chubykin, SK Mittal, G Zhang

GENETICS 

2020

 

In vivo glutamate sensing inside the mouse brain with perovskite nickelate-nafion heterostructures

Y Sun, T Nguyen, A Anderson, X Cheng, TE Gage, J Lim, Z Zhang, H Zhou, F Rodolakis, Z Zhang, I Arslan, Sh Ramanathan, H Lee, A Chubykin

ACS Applied Materials & Interfaces 12(22):24564–24574

 

Three-dimensional nanoscopy of whole cells and tissues with in situ point spread function retrieval

F Xu, D Ma, KP MacPherson, S Liu, Y Bu, Y Wang, Y Tang, C Bi, T Kwok, AA Chubykin, P Yin, S Calve, G E. Landreth, F Huang 

Nature Methods  17(1): 531–540

2020

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Fabrication and ex vivo evaluation of activated carbon–Pt microparticle based glutamate biosensor

T NH Nguyen, J Nolan, X Cheng, H Park, Y Wang, S Lam, H Lee, S J Kim, R Shi, AA Chubykin, H Lee​

Journal of Electroanalytical Chemistry 866(1)

2020

​

Visual Experience-Dependent Oscillations and Underlying Circuit Connectivity Changes Are Impaired in Fmr1 KO Mice

ST Kissinger, Q Wu, CJ Quinn, A Anderson, A Pak, AA Chubykin 

Cell Reports 31(1) 107486

2020

​

Top-Down Feedback Controls the Cortical Representation of Illusory Contours in Mouse Primary Visual Cortex

A Pak, E Ryu, C Li, AA Chubykin​

J. Neurosci 2019; 10.1523/JNEUROSCI.1998-19.2019

2019

​

Systems and methods for automated image-guided patch-clamp electrophysiology in vitro

AA Chubykin, Z Su, Q Wu

US Patent. 10,324,080 June 18. 2019

​

Perovskite nickelates as bio-electronic interfaces

HT Zhang, F Zuo, F Li, H Chan, Q Wu, Z Zhang, B Narayanan, ...

Nature communications 10 (1), 1651

2019

​

Oscillatory encoding of visual stimulus familiarity

ST Kissinger, A Pak, Y Tang, SC Masmanidis, AA Chubykin

Journal of Neuroscience 38 (27), 6223-6240

2018

​

Nanoladders Facilitate Directional Axonal Outgrowth and Regeneration

Y Huang, Y Jiang, Q Wu, X Wu, X An, AA Chubykin, JX Cheng, XM Xu, ...

ACS Biomaterials Science & Engineering 4 (3), 1037-1045

2018

​

Application of Automated Image-guided Patch Clamp for the Study of Neurons in Brain Slices

Q Wu, AA Chubykin

JoVE (Journal of Visualized Experiments), e56010

2017

​

A single-chip wireless microelectrode array for neural recording and stimulation

AYS Jou, H Shan, H Pajouhi, MS Tsai, S Ghotbi, Q Wu, AA Chubykin, ...

2017 IEEE MTT-S International Microwave Symposium (IMS), 1248-1250

2017

​

​

A Touchscreen Assay to Probe the Role of the Serotonergic System in Learning and Visual Information Processing

JM Dorsch, A Pak, AA Chubykin

2017

​

Developing Strategies for Anatomical Characterization of Locus Coeruleus–Cortical Projections

K Wang, Q Wu, AA Chubykin

2016

​

Integration of autopatching with automated pipette and cell detection in vitro

Q Wu, I Kolb, BM Callahan, Z Su, W Stoy, SB Kodandaramaiah, R Neve, ...

Journal of neurophysiology 116 (4), 1564-1578

2016

​

Contrasting roles for parvalbumin-expressing inhibitory neurons in two forms of adult visual cortical plasticity

ES Kaplan, SF Cooke, RW Komorowski, AA Chubykin, A Thomazeau, ...

Elife 5, e11450

2016

​

Behavioral Outputs of Fragile-X Autistic Mice Exposed to Open-Field, Randomized, Short-Term Visual Stimuli

NM DiCola, AA Chubykin

2015

​

Microchip amplifier for in vitro, in vivo, and automated whole cell patch-clamp recording

RR Harrison, I Kolb, SB Kodandaramaiah, AA Chubykin, A Yang, MF Bear, ...

Journal of neurophysiology 113 (4), 1275-1282

2014

​

A cholinergic mechanism for reward timing within primary visual cortex

AA Chubykin, EB Roach, MF Bear, MGH Shuler

Neuron 77 (4), 723-735

2013

​

Lovastatin corrects excess protein synthesis and prevents epileptogenesis in a mouse model of fragile X syndrome

EK Osterweil, SC Chuang, AA Chubykin, M Sidorov, R Bianchi, ...

Neuron 77 (2), 243-250

2013

​

Neurexins and Neuroligins: A Synaptic Code for Neuronal Wiring That Is Implicated in Autism

AA Chubykin

The Sticky Synapse, 347-365

2009

​

Activity-dependent validation of excitatory versus inhibitory synapses by neuroligin-1 versus neuroligin-2

AA Chubykin, D Atasoy, MR Etherton, N Brose, ET Kavalali, JR Gibson, ...

Neuron 54 (6), 919-931

2007

​

Role of Neuroligin in Synapse Formation and Autism

AA Chubykin

2006

​

A splice code for trans-synaptic cell adhesion mediated by binding of neuroligin 1 to α-and β-neurexins

AA Boucard, AA Chubykin, D Comoletti, P Taylor, TC Südhof

Neuron 48 (2), 229-236

2005

​

Dissection of Synapse Induction by Neuroligins EFFECT OF A NEUROLIGIN MUTATION ASSOCIATED WITH AUTISM

AA Chubykin, X Liu, D Comoletti, I Tsigelny, P Taylor, TC Südhof

Journal of Biological Chemistry 280 (23), 22365-22374

2005

​

Selective capability of SynCAM and neuroligin for functional synapse assembly

Y Sara, T Biederer, D Atasoy, A Chubykin, MG Mozhayeva, TC Südhof, ET Kavalali

Journal of Neuroscience 25 (1), 260-270 216

2005

​

Characterization of the interaction of a recombinant soluble neuroligin-1 with neurexin-1β

D Comoletti, R Flynn, LL Jennings, A Chubykin, T Matsumura, H Hasegawa, TC Südhof, P Taylor

Journal of Biological Chemistry 278 (50), 50497-50505

2003